Biochemical and Other Testing Methods

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Biochemical and Other Testing Methods

Creative methods to utilize the biochemicals without taking up the space needed for full-size tubes as well as decreasing incubation time, have also been developed over the years. A brief list is included here of manufacturer, general description, and the number of Corynebacterium species that each platform will identify. Each of these platforms also contain coryne-like organisms in the database.
Table 4. Biochemical and Other Testing Methods.
ManufacturerName of ID systemMethod descriptionAutomated/manual or both types of readingIncubation time# of Corynebacterium species in database per package insert
BiomerieuxAPI Coryne Enzymatic activity or the fermentation of carbohydrates with color change, type in biocode to API webservice for results.Manual (also need oil overlay for some wells and reagents for others. Requires additional testing of Gram stain and catalase.24 hours33
ThermoFisherRapid ID CB PlusCombination of conventional tests and single-substrate chromogenic tests, microcode can be looked up in ERIC database or compared to the differential chart supplied in the package insert.Manual (also needs reagents for some reactions). Requires additional testing of Gram stain and catalase.4-6 hours24
Becton Dickinson (BD)Crystal Gram Positive IDMiniaturized ID method using modified conventional, fluorogenic and chromogenic substrates.Both (no reagents or oil needed).18-24 hours16
Bruker (Merlin)MICRONAUT-RPOMicrotiter plate with ID and susceptibility.Automated (no reagents or oil needed).22-24 hours31
VitekVitek 2 ANCEnclosed system.Automated (no reagents or oil needed).As little as 2 hours8
BDPhoenix IDModifications of the classical methods. Including fermentation, oxidation, degradation and hydrolysis of various substrates. Also utilizes chromogenic and fluorogenic substrates and single carbon source substrates for ID.Automated (no reagents or oil needed). Requires additional Gram stain testing.Up to 16 hours if needed15
MIDISherlock Microbial IDChromatographic Analysis System (CAS) identifies fatty acid methyl esters (FAMEs) by gas chromatography. The entire fatty acid profile can be compared by pattern recognition to one of Sherlock’s microbial libraries (e.g. environmental aerobic bacteria).Automated (no Gram stain or other tests needed).Less than 2 hours32 (including subgoups)
ThermoFisherMicroSeqCombines PCR with sequencing through electrophoresis and compare to the libraryAutomated (no Gram stain or other tests needed).5 hours50 (as of 2018)
BiologMicrobial Identification System96 well MicroPlates incorporate a patented Redox tetrazolium dye that changes color from cellular respiration providing a metabolic fingerprint. Results are interpreted from database of organisms.Automated, semi-automated, or manual (no Gram stain or other tests needed).As little as 2 hours60